HHsearch alignment for GI: 254781215 and conserved domain: PRK09111
>PRK09111 DNA polymerase III subunits gamma and tau; Validated.
Probab=95.67 E-value=0.15 Score=28.31 Aligned_cols=152 Identities=16% Similarity=0.066 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCE-EEEEEC--CHHHHHHHHHHHHHHH
Q ss_conf 9999999999874056555421012465025765978999999999998089966-999808--5899999999999999
Q gi|254781215|r 55 QLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGIS-VICLAN--SETQLKTTLWAEVSKW 131 (511)
Q Consensus 55 Q~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~k-v~vtAp--t~~Q~~~ilw~Ei~k~ 131 (511)
T Consensus 28 q~~~~~~l~~~~~~~~~~~-----a~l~~g~rg~gktt~ari~a~~lnc~~~~~~~~~~~~~c~~c~~c~~i-------- 94 (600)
T PRK09111 28 QEAMVRTLRNAFETGRIAQ-----AFMLTGVRGVGKTTTARILARALNYKGPDGVGGPTIDPCGVGEHCQAI-------- 94 (600)
T ss_pred CHHHHHHHHHHHHCCCCCC-----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH--------
T ss_conf 5999999999997298420-----476457898789999999999966988766689988989988658988--------
Q ss_pred HHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHH
Q ss_conf 98550001344432222223334443211123578616985303575561002120267614999711102997889888
Q gi|254781215|r 132 LSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGI 211 (511)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i 211 (511)
T Consensus 95 -~~-----------------~~~~d~~e~daas~~~--v~~~r~~~~--~~~~~p~~~~~-kv~iidevhmls~~afnal 151 (600)
T PRK09111 95 -ME-----------------GRHVDVIEMDAASHTG--VDDIREIIE--SVRYRPVSARY-KVYIIDEVHMLSTAAFNAL 151 (600)
T ss_pred -HC-----------------CCCCCEEEEECCCCCC--HHHHHHHHH--HHCCCCCCCCE-EEEEEECCCCCCHHHHHHH
T ss_conf -66-----------------8998758851554578--889999998--60538877754-6999600110579999999
Q ss_pred HHHHCCCCCCEEEE-EECCCCCCCCHHHHHHH
Q ss_conf 88850799813899-82389987655676530
Q gi|254781215|r 212 LGFLTERNANRFWI-MTSNPRRLSGKFYEIFN 242 (511)
Q Consensus 212 ~~~Lt~~g~~~~~i-~~~nP~~~~g~fy~~~~ 242 (511)
T Consensus 152 lktleepp~~~~fi~att~~~k~p~ti~src~ 183 (600)
T PRK09111 152 LKTLEEPPPHVKFIFATTEIRKVPVTVLSRCQ 183 (600)
T ss_pred HHHHHCCCCCEEEEEECCCHHHCCHHHHHHHH
T ss_conf 98762598654999962853437589985441