HHsearch alignment for GI: 254781215 and conserved domain: PRK10590

>PRK10590 ATP-dependent RNA helicase RhlE; Provisional.
Probab=97.52  E-value=0.002  Score=40.23  Aligned_cols=75  Identities=20%  Similarity=0.197  Sum_probs=54.5

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC-------CCEEEEEECCHH
Q ss_conf             5557845899999999999874056555421012465025765978999999999998089-------966999808589
Q gi|254781215|r   46 EGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRP-------GISVICLANSET  118 (511)
Q Consensus        46 ~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p-------~~kv~vtApt~~  118 (511)
T Consensus        19 ~G~~~PTpIQ~~aIP~iL~G------r------Dvl~~A~TGSGKTlAflLPil~~l~~~~~~~~~~~~~~aLIL~PTRE   86 (457)
T PRK10590         19 QGYREPTPIQQQAIPAVLEG------R------DLMASAQTGTGKTAGFTLPLLQHLITRQPHAKGRRPVRALILTPTRE   86 (457)
T ss_pred             CCCCCCCHHHHHHHHHHHCC------C------CEEEECCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCHHH
T ss_conf             79999999999999999779------9------88998898118999999999999863676544568824999768799


Q ss_pred             HHHHHHHHHHHHHHH
Q ss_conf             999999999999998
Q gi|254781215|r  119 QLKTTLWAEVSKWLS  133 (511)
Q Consensus       119 Q~~~ilw~Ei~k~~~  133 (511)
T Consensus        87 LA~Qi-~~~~~~l~~  100 (457)
T PRK10590         87 LAAQI-GENVRDYSK  100 (457)
T ss_pred             HHHHH-HHHHHHHCC
T ss_conf             99999-999997425