HHsearch alignment for GI: 254781215 and conserved domain: PRK11634

>PRK11634 ATP-dependent RNA helicase DeaD; Provisional.
Probab=97.34  E-value=0.0038  Score=38.43  Aligned_cols=75  Identities=16%  Similarity=0.143  Sum_probs=54.4

Q ss_pred             CCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC-CCCEEEEEECCHHHHHHHH
Q ss_conf             555784589999999999987405655542101246502576597899999999999808-9966999808589999999
Q gi|254781215|r   46 EGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTR-PGISVICLANSETQLKTTL  124 (511)
Q Consensus        46 ~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~-p~~kv~vtApt~~Q~~~il  124 (511)
T Consensus        24 ~Gf~~PTpIQ~~aIP~iL~G------k------Dvi~~AqTGSGKTlAFlLPiL~~l~~~~~~pqaLIL~PTRELA~QV-   90 (629)
T PRK11634         24 LGYEKPSPIQAECIPHLLNG------R------DVLGMAQTGSGKTAAFSLPLLHNLDPELKAPQILVLAPTRELAVQV-   90 (629)
T ss_pred             CCCCCCCHHHHHHHHHHHCC------C------CEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHH-
T ss_conf             79999999999999999679------9------8899788847899999999999866236898689978998999999-


Q ss_pred             HHHHHHHHH
Q ss_conf             999999998
Q gi|254781215|r  125 WAEVSKWLS  133 (511)
Q Consensus       125 w~Ei~k~~~  133 (511)
T Consensus        91 ~~~~~~l~~   99 (629)
T PRK11634         91 AEAMTDFSK   99 (629)
T ss_pred             HHHHHHHHH
T ss_conf             999999972