HHsearch alignment for GI: 254781215 and conserved domain: TIGR02782

>TIGR02782 TrbB_P P-type conjugative transfer ATPase TrbB; InterPro: IPR014149 This entry represents TrbB, a protein, which is encoded in the trb locus of Agrobacterium Ti plasmids where it is involved in the type IV secretion system for plasmid conjugative transfer . TrbB is a homologue of the vir system VirB11 ATPase , and the Flp pilus system ATPase TadA ..

Probab=95.05  E-value=0.08  Score=30.11  Aligned_cols=100  Identities=16%  Similarity=0.227  Sum_probs=44.5

Q ss_pred             CCCEEEEEECCC---EEEEEEECCCCCHH-HHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHCC--CE--EEEECCC
Q ss_conf             841799982275---58998732778988-9999999999861888299800687636889898649--82--7984277
Q gi|254781215|r  329 GDNTVVVLRRGP---VIEHLFDWSKTDLR-TTNNKISGLVEKYRPDAIIIDANNTGARTCDYLEMLG--YH--VYRVLGQ  400 (511)
Q Consensus       329 ~D~svi~~r~G~---~v~~~~~~~~~d~~-~~a~~i~~~~~~~~~~~i~iD~~GvG~gV~d~L~~~g--~~--v~~v~~~  400 (511)
T Consensus       170 ~dR~vIiEDT~ElQC~A~N~V~lrT~d~~Gi~M~~LLk~TLRlRPDRI~VGEV-Rg~eAL~LLKAWNTGHPGGi~TiHAn  248 (315)
T TIGR02782       170 DDRVVIIEDTAELQCAAENLVALRTSDDVGISMTRLLKATLRLRPDRIIVGEV-RGGEALDLLKAWNTGHPGGIATIHAN  248 (315)
T ss_pred             CCEEEEEECCHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEE-CCHHHHHHHHHHCCCCCCCCEEECCC
T ss_conf             96189985471320137870687448986614788888750058873356301-43899999864058995302033148


Q ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC--HHHHHHHHH
Q ss_conf             7766402552279999999999997089998--189999985
Q gi|254781215|r  401 KRAVDLEFCRNRRTELHVKMADWLEFASLIN--HSGLIQNLK  440 (511)
Q Consensus       401 ~~~~~~~~y~N~rae~~~~~re~l~~g~l~~--d~~l~~el~  440 (511)
T Consensus       249 ~a----------~~-aL~RLeQLi~E~s~~~kP~~~lI~eav  279 (315)
T TIGR02782       249 NA----------KA-ALRRLEQLIAEVSVSPKPMQELIAEAV  279 (315)
T ss_pred             CH----------HH-HHHHHHHHHHHHCCCCCCHHHHHHHHH
T ss_conf             86----------68-999999999853589972057787541