HHsearch alignment for GI: 254781215 and conserved domain: pfam05127
>pfam05127 DUF699 Putative ATPase (DUF699). This putative domain is about 350 amino acid residues long and appears to have a P-loop motif, suggesting this is an ATPase. This domain is often associated with pfam00583. This domain is found in isolation in the uncharacterized protein HI1254 from Haemophilus influenzae.
Probab=96.77 E-value=0.04 Score=31.97 Aligned_cols=92 Identities=17% Similarity=0.107 Sum_probs=48.9
Q ss_pred HHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCC
Q ss_conf 99999808996699980858999999999999999855000134443222222333444321112357861698530357
Q gi|254781215|r 98 VLWLMSTRPGISVICLANSETQLKTTLWAEVSKWLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYS 177 (511)
Q Consensus 98 ~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s 177 (511)
T Consensus 4 a~a~li~~~~~~I~VTAP~~~nv~-~lf~~~~~~L~~lg~~~--------~-----~~~~~~~~~~~~~~~i-------~ 62 (160)
T pfam05127 4 AAAALIAQGYSRILVTAPSPANVQ-TLFEFAIKGLDALGYKP--------K-----KREGIIASLRGNGQRI-------R 62 (160)
T ss_pred HHHHHHHCCCCEEEEECCCHHHHH-HHHHHHHHHHHHCCCCC--------C-----CCCCCEEEEECCCEEE-------E
T ss_conf 999999859973999799989999-99999999998638643--------4-----5655047875287689-------9
Q ss_pred CCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHH
Q ss_conf 5561002120267614999711102997889888
Q gi|254781215|r 178 EERPDTFVGHHNTYGMAIINDEASGTPDVINLGI 211 (511)
Q Consensus 178 ~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i 211 (511)
T Consensus 63 f~~Pd~l~~~~-~~~DllvVDEAAaIP~p~L~~l 95 (160)
T pfam05127 63 FIAPDELLKLP-PQADLLVVDEAAAIPLPLLKQL 95 (160)
T ss_pred EECCHHHHHCC-CCCCEEEEEHHHCCCHHHHHHH
T ss_conf 96808986167-8776899732421888999999