HHsearch results for GI: 254781215 and protein with PDBid: 1a5t_A

>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=97.00  E-value=0.006  Score=35.82  Aligned_cols=149  Identities=17%  Similarity=0.138  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf             89999999999987405655542101246502576597899999999999808996699980858999999999999999
Q gi|254781215|r   53 SWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWL  132 (511)
Q Consensus        53 ~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~  132 (511)
                      +||.+..+.+.....++..-|     -.-..+..|+|||+++-.++-+.++..+...-.|..-  ..-+     .+.  .
T Consensus         5 pw~~~~~~~L~~~~~~~~l~h-----a~L~~G~~G~GK~~~a~~~a~~llc~~~~~~~~c~~c--~~c~-----~i~--~   70 (334)
T 1a5t_A            5 PWLRPDFEKLVASYQAGRGHH-----ALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHC--RGCQ-----LMQ--A   70 (334)
T ss_dssp             GGGHHHHHHHHHHHHTTCCCS-----EEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCS--HHHH-----HHH--H
T ss_pred             CCCHHHHHHHHHHHHCCCCCE-----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC--HHHH-----HHH--C
T ss_conf             010999999999998699560-----3635899998899999999999708799888888666--8999-----997--5


Q ss_pred             HHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHH
Q ss_conf             85500013444322222233344432111235786169853035755610021202676149997111029978898888
Q gi|254781215|r  133 SLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGIL  212 (511)
Q Consensus       133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~  212 (511)
                      ...|.-..+....   .......+.               .|.....  -+.....+.+ -.+|+|||..+.....+++.
T Consensus        71 ~~hpd~~~i~~~~---~~~~i~i~~---------------iR~l~~~--~~~~~~~~~~-kiiiI~~ad~m~~~a~nalL  129 (334)
T 1a5t_A           71 GTHPDYYTLAPEK---GKNTLGVDA---------------VREVTEK--LNEHARLGGA-KVVWVTDAALLTDAAANALL  129 (334)
T ss_dssp             TCCTTEEEECCCT---TCSSBCHHH---------------HHHHHHH--TTSCCTTSSC-EEEEESCGGGBCHHHHHHHH
T ss_pred             CCCCCEEEECCHH---CCCCCCHHH---------------HHHHHHH--HHHCCCCCCC-EEEEECCHHHCCHHHHHHHH
T ss_conf             7999745432121---046578999---------------9999998--6426446895-79997784544865689999


Q ss_pred             HHHCCCCCCEEEEEE-CCCCCCCCH
Q ss_conf             885079981389982-389987655
Q gi|254781215|r  213 GFLTERNANRFWIMT-SNPRRLSGK  236 (511)
Q Consensus       213 ~~Lt~~g~~~~~i~~-~nP~~~~g~  236 (511)
                      -+|-.+....+++.+ .+|...--.
T Consensus       130 K~lEeP~~~~~fil~t~~~~~ll~T  154 (334)
T 1a5t_A          130 KTLEEPPAETWFFLATREPERLLAT  154 (334)
T ss_dssp             HHHTSCCTTEEEEEEESCGGGSCHH
T ss_pred             HHHHCCCCCCEEEEECCCHHHCCCC
T ss_conf             9986597331343204876634352