HHsearch results for GI: 254781215 and protein with PDBid: 1a5t_A
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=97.00 E-value=0.006 Score=35.82 Aligned_cols=149 Identities=17% Similarity=0.138 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf 89999999999987405655542101246502576597899999999999808996699980858999999999999999
Q gi|254781215|r 53 SWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWL 132 (511)
Q Consensus 53 ~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~ 132 (511)
+||.+..+.+.....++..-| -.-..+..|+|||+++-.++-+.++..+...-.|..- ..-+ .+. .
T Consensus 5 pw~~~~~~~L~~~~~~~~l~h-----a~L~~G~~G~GK~~~a~~~a~~llc~~~~~~~~c~~c--~~c~-----~i~--~ 70 (334)
T 1a5t_A 5 PWLRPDFEKLVASYQAGRGHH-----ALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCGHC--RGCQ-----LMQ--A 70 (334)
T ss_dssp GGGHHHHHHHHHHHHTTCCCS-----EEEEECCTTSCHHHHHHHHHHHHTCSSCBTTBCCSCS--HHHH-----HHH--H
T ss_pred CCCHHHHHHHHHHHHCCCCCE-----EEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCC--HHHH-----HHH--C
T ss_conf 010999999999998699560-----3635899998899999999999708799888888666--8999-----997--5
Q ss_pred HHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHHHH
Q ss_conf 85500013444322222233344432111235786169853035755610021202676149997111029978898888
Q gi|254781215|r 133 SLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLGIL 212 (511)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~i~ 212 (511)
...|.-..+.... .......+. .|..... -+.....+.+ -.+|+|||..+.....+++.
T Consensus 71 ~~hpd~~~i~~~~---~~~~i~i~~---------------iR~l~~~--~~~~~~~~~~-kiiiI~~ad~m~~~a~nalL 129 (334)
T 1a5t_A 71 GTHPDYYTLAPEK---GKNTLGVDA---------------VREVTEK--LNEHARLGGA-KVVWVTDAALLTDAAANALL 129 (334)
T ss_dssp TCCTTEEEECCCT---TCSSBCHHH---------------HHHHHHH--TTSCCTTSSC-EEEEESCGGGBCHHHHHHHH
T ss_pred CCCCCEEEECCHH---CCCCCCHHH---------------HHHHHHH--HHHCCCCCCC-EEEEECCHHHCCHHHHHHHH
T ss_conf 7999745432121---046578999---------------9999998--6426446895-79997784544865689999
Q ss_pred HHHCCCCCCEEEEEE-CCCCCCCCH
Q ss_conf 885079981389982-389987655
Q gi|254781215|r 213 GFLTERNANRFWIMT-SNPRRLSGK 236 (511)
Q Consensus 213 ~~Lt~~g~~~~~i~~-~nP~~~~g~ 236 (511)
-+|-.+....+++.+ .+|...--.
T Consensus 130 K~lEeP~~~~~fil~t~~~~~ll~T 154 (334)
T 1a5t_A 130 KTLEEPPAETWFFLATREPERLLAT 154 (334)
T ss_dssp HHHTSCCTTEEEEEEESCGGGSCHH
T ss_pred HHHHCCCCCCEEEEECCCHHHCCCC
T ss_conf 9986597331343204876634352