HHsearch results for GI: 254781215 and protein with PDBid: 1gm5_A

>1gm5_A RECG; helicase, replication restart; HET: DNA ADP; 3.24A {Thermotoga maritima} SCOP: a.24.21.1 b.40.4.9 c.37.1.19 c.37.1.19
Probab=96.86  E-value=0.015  Score=33.28  Aligned_cols=75  Identities=11%  Similarity=0.106  Sum_probs=55.5

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHH
Q ss_conf             89999999999987405655542101246502576597899999999999808996699980858999999999999999
Q gi|254781215|r   53 SWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSKWL  132 (511)
Q Consensus        53 ~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k~~  132 (511)
                      .=|++++.+|......+..      ..+-|.+.-|+|||.++...++..+.  .+.++++.|||..=+.++ ..+++++.
T Consensus       371 ~~Q~~~~~~i~~d~~~~~~------~~~Llqa~TGSGKTlv~llpil~~i~--~g~q~lilaPTreLA~Q~-~~~~k~l~  441 (780)
T 1gm5_A          371 NAQKRAHQEIRNDMISEKP------MNRLLQGDVGSGKTVVAQLAILDNYE--AGFQTAFMVPTSILAIQH-YRRTVESF  441 (780)
T ss_dssp             HHHHHHHHHHHHHHHSSSC------CCCEEECCSSSSHHHHHHHHHHHHHH--HTSCEEEECSCHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHCCCCC------CEEEEECCCCCCCHHHHHHHHHHHHH--CCCCEEEEECCHHHHHHH-HHHHHHHH
T ss_conf             8899999999998618987------52899817897460999999999986--389559992528999999-99998761


Q ss_pred             HHCH
Q ss_conf             8550
Q gi|254781215|r  133 SLLP  136 (511)
Q Consensus       133 ~~~~  136 (511)
                      ....
T Consensus       442 ~~~~  445 (780)
T 1gm5_A          442 SKFN  445 (780)
T ss_dssp             TCSS
T ss_pred             CCCC
T ss_conf             1578