HHsearch results for GI: 254781215 and protein with PDBid: 1iqp_A
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=95.75 E-value=0.087 Score=28.50 Aligned_cols=128 Identities=16% Similarity=0.068 Sum_probs=72.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC-CEEEEEECCHHHH
Q ss_conf 775655578458999999999998740565554210124650257659789999999999980899-6699980858999
Q gi|254781215|r 42 GTPLEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPG-ISVICLANSETQL 120 (511)
Q Consensus 42 ~~~~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~-~kv~vtApt~~Q~ 120 (511)
++.+..+.| |.++.+.+.....++.. |. +-..++.|+|||+++-.++--..+.... ....+.+++.+..
T Consensus 21 P~~~~dlig----~~~~~~~L~~~~~~~~~---p~---lll~Gp~G~GKTtla~~lak~~~~~~~~~~~~~~~~~~~~~~ 90 (327)
T 1iqp_A 21 PQRLDDIVG----QEHIVKRLKHYVKTGSM---PH---LLFAGPPGVGKTTAALALARELFGENWRHNFLELNASDERGI 90 (327)
T ss_dssp CCSTTTCCS----CHHHHHHHHHHHHHTCC---CE---EEEESCTTSSHHHHHHHHHHHHHGGGHHHHEEEEETTCHHHH
T ss_pred CCCHHHHCC----CHHHHHHHHHHHHCCCC---CE---EEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEECCCCCCH
T ss_conf 998999239----69999999999977999---86---987898999999999999999764014777113445455664
Q ss_pred HHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCH
Q ss_conf 99999999999985500013444322222233344432111235786169853035755610021202676149997111
Q gi|254781215|r 121 KTTLWAEVSKWLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEA 200 (511)
Q Consensus 121 ~~ilw~Ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEA 200 (511)
..+. ......... ....+....++++||+
T Consensus 91 ~~~~-~~~~~~~~~--------------------------------------------------~~~~~~~~~viiide~ 119 (327)
T 1iqp_A 91 NVIR-EKVKEFART--------------------------------------------------KPIGGASFKIIFLDEA 119 (327)
T ss_dssp HTTH-HHHHHHHHS--------------------------------------------------CCGGGCSCEEEEEETG
T ss_pred HHHH-HHHHHHHHC--------------------------------------------------CCCCCCCEEEEEEECC
T ss_conf 8999-999999863--------------------------------------------------1236887269998676
Q ss_pred HCCCHHHHHHHHHHHCCCCCCEEEEEECCC
Q ss_conf 029978898888885079981389982389
Q gi|254781215|r 201 SGTPDVINLGILGFLTERNANRFWIMTSNP 230 (511)
Q Consensus 201 sgI~d~i~e~i~~~Lt~~g~~~~~i~~~nP 230 (511)
..+......++...+-.......++.+.+.
T Consensus 120 ~~~~~~~~~~Ll~~le~~~~~~~~i~~~~~ 149 (327)
T 1iqp_A 120 DALTQDAQQALRRTMEMFSSNVRFILSCNY 149 (327)
T ss_dssp GGSCHHHHHHHHHHHHHTTTTEEEEEEESC
T ss_pred CCCCHHHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 646576899999988505775145523686