HHsearch results for GI: 254781215 and protein with PDBid: 1oyw_A

>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*

Probab=96.99  E-value=0.0049  Score=36.35  Aligned_cols=61  Identities=16%  Similarity=0.119  Sum_probs=43.1

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHH
Q ss_conf             557845899999999999874056555421012465025765978999999999998089966999808589999999
Q gi|254781215|r   47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTL  124 (511)
Q Consensus        47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~il  124 (511)
                      +|+.+++.|++++.++-.+      +      -+-|.++.|.|||.+...-++   .  .+..++|++|+..-+.+..
T Consensus        22 G~~~~rp~Q~~aI~~iL~G------~------Dvlv~apTGsGKTL~y~LP~l---~--~~~~~lVIsPl~~L~~qq~   82 (523)
T 1oyw_A           22 GYQQFRPGQEEIIDTVLSG------R------DCLVVMPTGGGKSLCYQIPAL---L--LNGLTVVVSPLISLMKDQV   82 (523)
T ss_dssp             CCSSCCTTHHHHHHHHHTT------C------CEEEECSCHHHHHHHHHHHHH---H--SSSEEEEECSCHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHCC------C------CEEEECCCCCHHHHHHHHHHH---H--CCCCEEEECCHHHHHHHHH
T ss_conf             9899998999999999839------9------889986998469999999999---8--0996899887699999999