HHsearch results for GI: 254781215 and protein with PDBid: 1qde_A

>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A

Probab=96.98  E-value=0.0043  Score=36.75  Aligned_cols=65  Identities=20%  Similarity=0.160  Sum_probs=49.0

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHC-CCCEEEEEECCHHHHHHH
Q ss_conf             55784589999999999987405655542101246502576597899999999999808-996699980858999999
Q gi|254781215|r   47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTR-PGISVICLANSETQLKTT  123 (511)
Q Consensus        47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~-p~~kv~vtApt~~Q~~~i  123 (511)
                      +|..|-+-|++.+-.+-..      +      -+.+.|+.|+|||.....-++-.+... ...++++.+||..-+..+
T Consensus        33 g~~~pt~IQ~~aip~il~g------~------dvii~a~TGsGKTlay~lp~i~~i~~~~~~~~~lil~pt~el~~q~   98 (224)
T 1qde_A           33 GFEEPSAIQQRAIMPIIEG------H------DVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQALMLAPTRELALQI   98 (224)
T ss_dssp             TCCSCCHHHHHHHHHHHTT------C------CEEEECCTTSSHHHHHHHHHHHHCCTTCCSCCEEEECSSHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHCC------C------CEEEECCCCCCCEEEEECHHHHHHHCCCCCCEEEEEECCHHHHHHH
T ss_conf             9999999999999999779------9------8899898888751245211055551256683399992545254343