HHsearch results for GI: 254781215 and protein with PDBid: 1t6n_A
>1t6n_A Probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; HET: FLC; 1.94A {Homo sapiens} SCOP: c.37.1.19
Probab=97.20 E-value=0.0015 Score=39.66 Aligned_cols=75 Identities=19% Similarity=0.193 Sum_probs=54.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCC-CCEEEEEECCHHHHHHHHH
Q ss_conf 557845899999999999874056555421012465025765978999999999998089-9669998085899999999
Q gi|254781215|r 47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRP-GISVICLANSETQLKTTLW 125 (511)
Q Consensus 47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p-~~kv~vtApt~~Q~~~ilw 125 (511)
+|.-|-+-|++.+..+-.. + -+.+.|..|+|||.....-++..+.... ..++++.+||..-+.++ .
T Consensus 33 g~~~pt~iQ~~aip~il~g------~------dvii~a~TGSGKTlay~lp~~~~~~~~~~~~~~lil~PtreLa~qi-~ 99 (220)
T 1t6n_A 33 GFEHPSEVQHECIPQAILG------M------DVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQI-S 99 (220)
T ss_dssp TCCCCCHHHHHHHHHHHTT------C------CEEEECCTTSCHHHHHHHHHHHHCCCCTTCCCEEEECSCHHHHHHH-H
T ss_pred CCCCCCHHHHHHHHHHHCC------C------CEEEECCCCCCCHHHHCCCHHHCCCCCCCCCEEEEECCCHHHHHHH-H
T ss_conf 9999999999999999779------9------8899777998720131141121135677883189937989999999-9
Q ss_pred HHHHHHHHH
Q ss_conf 999999985
Q gi|254781215|r 126 AEVSKWLSL 134 (511)
Q Consensus 126 ~Ei~k~~~~ 134 (511)
.++.+....
T Consensus 100 ~~~~~~~~~ 108 (220)
T 1t6n_A 100 KEYERFSKY 108 (220)
T ss_dssp HHHHHHTTT
T ss_pred HHHHHHHHH
T ss_conf 999999830