HHsearch results for GI: 254781215 and protein with PDBid: 1vec_A
>1vec_A ATP-dependent RNA helicase P54; DEAD-box protein, RNA binding protein; HET: TLA; 2.01A {Homo sapiens} SCOP: c.37.1.19
Probab=97.14 E-value=0.0019 Score=38.98 Aligned_cols=70 Identities=14% Similarity=0.112 Sum_probs=51.4
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH-CCCCEEEEEECCHHHHHHHHH
Q ss_conf 5578458999999999998740565554210124650257659789999999999980-899669998085899999999
Q gi|254781215|r 47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMST-RPGISVICLANSETQLKTTLW 125 (511)
Q Consensus 47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~-~p~~kv~vtApt~~Q~~~ilw 125 (511)
+|+-|-+.|++++..+-.. + -+.+.|..|+|||.....-++..+.. ..+..+++..|+..-+..+ .
T Consensus 22 g~~~pt~iQ~~aip~il~G------~------dvi~~a~tGsGKTlayllp~l~~~~~~~~~~~~~i~~~~~~l~~~~-~ 88 (206)
T 1vec_A 22 GWEKPSPIQEESIPIALSG------R------DILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRELALQV-S 88 (206)
T ss_dssp TCCSCCHHHHHHHHHHHTT------C------CEEEECCSSSTTHHHHHHHHHHHCCTTSCSCCEEEECSCHHHHHHH-H
T ss_pred CCCCCCHHHHHHHHHHHCC------C------CEEEEECCCCCCEEEEECCHHHHCCCCCCCCCEEEEECCHHHHHHH-H
T ss_conf 9999999999999999879------9------8899930799840156434243012345786237873328899999-9
Q ss_pred HHHH
Q ss_conf 9999
Q gi|254781215|r 126 AEVS 129 (511)
Q Consensus 126 ~Ei~ 129 (511)
.++.
T Consensus 89 ~~~~ 92 (206)
T 1vec_A 89 QICI 92 (206)
T ss_dssp HHHH
T ss_pred HHHH
T ss_conf 9998