HHsearch results for GI: 254781215 and protein with PDBid: 1yks_A
>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=96.49 E-value=0.021 Score=32.34 Aligned_cols=44 Identities=18% Similarity=0.124 Sum_probs=30.6
Q ss_pred EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
Q ss_conf 246502576597899999999999808996699980858999999
Q gi|254781215|r 79 KGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTT 123 (511)
Q Consensus 79 r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~i 123 (511)
-+-|.+.-|+|||......++..... .+.+++|++||..-++++
T Consensus 10 ~~vl~~~TGSGKT~~~l~~ll~~~~~-~~~rvlvl~PtR~La~qv 53 (440)
T 1yks_A 10 TTVLDFHPGAGKTRRFLPQILAECAR-RRLRTLVLAPTRVVLSEM 53 (440)
T ss_dssp EEEECCCTTSSTTTTHHHHHHHHHHH-TTCCEEEEESSHHHHHHH
T ss_pred CEEEEECCCCCHHHHHHHHHHHHHHC-CCCEEEEEHHHHHHHHHH
T ss_conf 28999889986989999999998754-898399984299999999