HHsearch results for GI: 254781215 and protein with PDBid: 1yks_A

>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=96.49  E-value=0.021  Score=32.34  Aligned_cols=44  Identities=18%  Similarity=0.124  Sum_probs=30.6

Q ss_pred             EEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHH
Q ss_conf             246502576597899999999999808996699980858999999
Q gi|254781215|r   79 KGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTT  123 (511)
Q Consensus        79 r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~i  123 (511)
                      -+-|.+.-|+|||......++..... .+.+++|++||..-++++
T Consensus        10 ~~vl~~~TGSGKT~~~l~~ll~~~~~-~~~rvlvl~PtR~La~qv   53 (440)
T 1yks_A           10 TTVLDFHPGAGKTRRFLPQILAECAR-RRLRTLVLAPTRVVLSEM   53 (440)
T ss_dssp             EEEECCCTTSSTTTTHHHHHHHHHHH-TTCCEEEEESSHHHHHHH
T ss_pred             CEEEEECCCCCHHHHHHHHHHHHHHC-CCCEEEEEHHHHHHHHHH
T ss_conf             28999889986989999999998754-898399984299999999