HHsearch results for GI: 254781215 and protein with PDBid: 2chg_A
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=95.83 E-value=0.081 Score=28.70 Aligned_cols=128 Identities=16% Similarity=0.088 Sum_probs=69.6
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEE-ECCHHHH
Q ss_conf 775655578458999999999998740565554210124650257659789999999999980899669998-0858999
Q gi|254781215|r 42 GTPLEGFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICL-ANSETQL 120 (511)
Q Consensus 42 ~~~~~~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vt-Apt~~Q~ 120 (511)
++.+..+.| |.++++.+.....++.. |. +-+.+..|+|||+++-.++-..........++.. +......
T Consensus 13 P~~~~diig----~~~~~~~l~~~i~~~~~---~~---~Ll~Gp~G~GKTtla~~iak~l~~~~~~~~~~~~n~~~~~~~ 82 (226)
T 2chg_A 13 PRTLDEVVG----QDEVIQRLKGYVERKNI---PH---LLFSGPPGTGKTATAIALARDLFGENWRDNFIEMNASDERGI 82 (226)
T ss_dssp CSSGGGCCS----CHHHHHHHHHHHHTTCC---CC---EEEECSTTSSHHHHHHHHHHHHHGGGGGGGEEEEETTCTTCH
T ss_pred CCCHHHHCC----HHHHHHHHHHHHHCCCC---CE---EEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCEEECCCCCCH
T ss_conf 998999209----89999999999976999---85---988899999889999999999843555677132346776769
Q ss_pred HHHHHHHHHHHHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCH
Q ss_conf 99999999999985500013444322222233344432111235786169853035755610021202676149997111
Q gi|254781215|r 121 KTTLWAEVSKWLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEA 200 (511)
Q Consensus 121 ~~ilw~Ei~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEA 200 (511)
+.+...+...... .... ... ..++|+||+
T Consensus 83 -~~~~~~~~~~~~~-----------------------------------------------~~~~--~~~-~~~iiide~ 111 (226)
T 2chg_A 83 -DVVRHKIKEFART-----------------------------------------------APIG--GAP-FKIIFLDEA 111 (226)
T ss_dssp -HHHHHHHHHHHTS-----------------------------------------------CCST--TCS-CEEEEEETG
T ss_pred -HHHHHHHHHHHHC-----------------------------------------------CCCC--CCC-EEEEEECCH
T ss_conf -9999999999860-----------------------------------------------1126--986-699995112
Q ss_pred HCCCHHHHHHHHHHHCCCCCCEEEEEECCC
Q ss_conf 029978898888885079981389982389
Q gi|254781215|r 201 SGTPDVINLGILGFLTERNANRFWIMTSNP 230 (511)
Q Consensus 201 sgI~d~i~e~i~~~Lt~~g~~~~~i~~~nP 230 (511)
..++.....++...|........++.+.+.
T Consensus 112 ~~l~~~~q~~ll~~le~~~~~~~~i~~~~~ 141 (226)
T 2chg_A 112 DALTADAQAALRRTMEMYSKSCRFILSCNY 141 (226)
T ss_dssp GGSCHHHHHHHHHHHHHTTTTEEEEEEESC
T ss_pred HHCCHHHHHHHHHHHHHCCCCCEEEECCCC
T ss_conf 016899999988876427765447736798