HHsearch results for GI: 254781215 and protein with PDBid: 2xgj_A
>2xgj_A ATP-dependent RNA helicase DOB1; hydrolase-RNA complex, hydrolase, tramp, exosome, DEAD, nucleotide-binding; HET: ADP; 2.90A {Saccharomyces cerevisiae}
Probab=98.31 E-value=1.8e-05 Score=51.69 Aligned_cols=68 Identities=15% Similarity=0.101 Sum_probs=47.1
Q ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHH
Q ss_conf 84589999999999987405655542101246502576597899999999999808996699980858999999999999
Q gi|254781215|r 50 APRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVS 129 (511)
Q Consensus 50 ~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~ 129 (511)
.|++||++++..|-.. . .+-|.+..|.|||.++... +..++. .+.++++++||..=+.++ +.+++
T Consensus 86 ~l~~~Q~~ai~~l~~g----~--------~vlv~apTGSGKT~va~~~-i~~~l~-~~~rvl~l~Pt~~L~~Q~-~~~~~ 150 (1010)
T 2xgj_A 86 TLDPFQDTAISCIDRG----E--------SVLVSAHTSAGKTVVAEYA-IAQSLK-NKQRVIYTSPIKALSNQK-YRELL 150 (1010)
T ss_dssp CCCHHHHHHHHHHHHT----C--------EEEEECCTTSCHHHHHHHH-HHHHHH-TTCEEEEEESSHHHHHHH-HHHHH
T ss_pred CCCHHHHHHHHHHHCC----C--------CEEEEECCCCHHHHHHHHH-HHHHHH-CCCCEEEECCHHHHHHHH-HHHHH
T ss_conf 9899999999999839----9--------9999908986599999999-999996-099599998969999999-99999
Q ss_pred HHH
Q ss_conf 999
Q gi|254781215|r 130 KWL 132 (511)
Q Consensus 130 k~~ 132 (511)
+..
T Consensus 151 ~~~ 153 (1010)
T 2xgj_A 151 AEF 153 (1010)
T ss_dssp HHH
T ss_pred HHC
T ss_conf 755