HHsearch results for GI: 254781215 and protein with PDBid: 2zpa_A
>2zpa_A Uncharacterized protein YPFI; RNA modification enzyme, RNA helicase, acetyltransferase, GCN5 acetyltransferase; HET: ACO ADP; 2.35A {Escherichia coli K12}
Probab=98.20 E-value=1.4e-05 Score=52.41 Aligned_cols=154 Identities=17% Similarity=0.172 Sum_probs=83.0
Q ss_pred CHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHH
Q ss_conf 45899999999999874056555421012465025765978999999999998089966999808589999999999999
Q gi|254781215|r 51 PRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMSTRPGISVICLANSETQLKTTLWAEVSK 130 (511)
Q Consensus 51 P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~~p~~kv~vtApt~~Q~~~ilw~Ei~k 130 (511)
|-.=|.+++..+..+.. .-+.+.+.||=|||+++..++-. -..+|+||||+...+..+ |.-...
T Consensus 176 ~t~~Q~~~l~~l~~~~~----------~~~vitAdRGRGKSaalGla~a~-----~~~~i~VTAP~~~~v~~l-f~~a~~ 239 (671)
T 2zpa_A 176 PQPEQQQLLKQLMTMPP----------GVAAVTAARGRGKSALAGQLISR-----IAGRAIVTAPAKASTDVL-AQFAGE 239 (671)
T ss_dssp CCHHHHHHHHHHTTCCS----------EEEEEEECTTSSHHHHHHHHHHH-----SSSCEEEECSSCCSCHHH-HHHHGG
T ss_pred CCHHHHHHHHHHHHCCC----------CCEEEECCCCCCHHHHHHHHHHH-----HCCCEEEECCCHHHHHHH-HHHCCC
T ss_conf 85999999999984367----------73587679998599999999995-----269789989998999999-997058
Q ss_pred HHHHCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCHHHHCCCCCCEEEEECCHHCCCHHHHHH
Q ss_conf 99855000134443222222333444321112357861698530357556100212026761499971110299788988
Q gi|254781215|r 131 WLSLLPNKHWFEMQSLSLHPAPWYSDVLHCSLGIDSKHYSTMCRTYSEERPDTFVGHHNTYGMAIINDEASGTPDVINLG 210 (511)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~ea~~G~h~~~~~lvI~DEAsgI~d~i~e~ 210 (511)
. .+--.|+.+-..... ..++|+|||+.||-.+-..
T Consensus 240 ----~----------------------------------------~~f~aPd~ll~~~~~-~dlLiVDEAAaIP~p~L~~ 274 (671)
T 2zpa_A 240 ----K----------------------------------------FRFIAPDALLASDEQ-ADWLVVDEAAAIPAPLLHQ 274 (671)
T ss_dssp ----G----------------------------------------CCBCCHHHHHHSCCC-CSEEEEETGGGSCHHHHHH
T ss_pred ----C----------------------------------------EEEECCHHHHCCCCC-CCEEEEECHHCCCHHHHHH
T ss_conf ----7----------------------------------------299881587536787-7889996241298999999
Q ss_pred HHHHHCCCCCCEEEEEECCCCCCCCH-HHHHHHCCCCCCEEEEECCCCCCCC--CHHHHHHHHHH
Q ss_conf 88885079981389982389987655-6765303524741798404336778--97789999975
Q gi|254781215|r 211 ILGFLTERNANRFWIMTSNPRRLSGK-FYEIFNKPLDDWKRFQIDTRTVEGI--DPSFHEGIIAR 272 (511)
Q Consensus 211 i~~~Lt~~g~~~~~i~~~nP~~~~g~-fy~~~~~~~~~w~~~~i~~~~~p~~--~~~~ie~~~~~ 272 (511)
+.. .-.+..+..|-+..--+|+ |--.|.+.-+.|..++ .+-|.. ..+=+|.|..+
T Consensus 275 l~~----~~~rvvfsTTihGYEGtGRgF~lkf~~~L~~~~~~~---L~~PIRwa~~DPlE~wl~~ 332 (671)
T 2zpa_A 275 LVS----RFPRTLLTTTVQGYEGTGRGFLLKFCARFPHLHRFE---LQQPIRWAQGCPLEKMVSE 332 (671)
T ss_dssp HHT----TSSEEEEEEEBSSTTBBCHHHHHHHHHTSTTCEEEE---CCSCSSSCTTCHHHHHHHH
T ss_pred HHH----HCCEEEEEEECCCCCCCCHHHHHHHHHHCHHHEEEE---CCCCCCCCCCCCHHHHHHH
T ss_conf 974----478589995147511546999999987470107986---6686317998978999988