HHsearch results for GI: 254781215 and protein with PDBid: 3bor_A
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helicase, alternative splicing, ATP-binding; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=96.96 E-value=0.0032 Score=37.52 Aligned_cols=72 Identities=18% Similarity=0.112 Sum_probs=50.7
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH-CCCCEEEEEECCHHHHHHHHH
Q ss_conf 5578458999999999998740565554210124650257659789999999999980-899669998085899999999
Q gi|254781215|r 47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMST-RPGISVICLANSETQLKTTLW 125 (511)
Q Consensus 47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~-~p~~kv~vtApt~~Q~~~ilw 125 (511)
+|..|-+-|++.+..+-.. + -+.+.|..|+|||.....-++..+.. .....+++.+||..-+..+ .
T Consensus 49 g~~~pt~IQ~~aIp~il~g------~------dvi~~A~TGSGKTlayllp~~~~~~~~~~~~~~lIl~PtreLa~Qi-~ 115 (237)
T 3bor_A 49 GFEKPSAIQQRAIIPCIKG------Y------DVIAQAQSGTGKTATFAISILQQLEIEFKETQALVLAPTRELAQQI-Q 115 (237)
T ss_dssp TCCSCCHHHHHHHHHHHTT------C------CEEECCCSSHHHHHHHHHHHHHHCCTTSCSCCEEEECSSHHHHHHH-H
T ss_pred CCCCCCHHHHHHHHHHHCC------C------CEEEECCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCHHHHHHHH-H
T ss_conf 9999999999999999779------9------8899798888982168645223424445676289952718899999-9
Q ss_pred HHHHHH
Q ss_conf 999999
Q gi|254781215|r 126 AEVSKW 131 (511)
Q Consensus 126 ~Ei~k~ 131 (511)
..+.+.
T Consensus 116 ~~~~~l 121 (237)
T 3bor_A 116 KVILAL 121 (237)
T ss_dssp HHHHHH
T ss_pred HHHHHH
T ss_conf 999997