HHsearch results for GI: 254781215 and protein with PDBid: 3dkp_A

>3dkp_A Probable ATP-dependent RNA helicase DDX52; DEAD, ADP, structural genomics, structural genomics consortium, SGC, rRNA, ATP-binding, hydrolase; HET: ADP; 2.10A {Homo sapiens}
Probab=98.15  E-value=2.1e-05  Score=51.35  Aligned_cols=74  Identities=20%  Similarity=0.225  Sum_probs=54.6

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH--CCCCEEEEEECCHHHHHHHH
Q ss_conf             5578458999999999998740565554210124650257659789999999999980--89966999808589999999
Q gi|254781215|r   47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMST--RPGISVICLANSETQLKTTL  124 (511)
Q Consensus        47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~--~p~~kv~vtApt~~Q~~~il  124 (511)
                      +|..|-+.|++++..+-..      +      -+.|.++.|+|||......++-.+..  ..+.++++++||..-+.++.
T Consensus        48 g~~~ptpiQ~~ai~~il~g------~------dviv~apTGsGKT~~~~~~il~~~~~~~~~~~~~lil~Ptr~La~q~~  115 (245)
T 3dkp_A           48 GFQMPTPIQMQAIPVMLHG------R------ELLASAPTGSGKTLAFSIPILMQLKQPANKGFRALIISPTRELASQIH  115 (245)
T ss_dssp             TCCSCCHHHHHHHHHHHTT------C------CEEEECCTTSCHHHHHHHHHHHHHCSCCSSSCCEEEECSSHHHHHHHH
T ss_pred             CCCCCCHHHHHHHHHHHCC------C------CEEEECCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHHHHH
T ss_conf             9999999999999999779------9------889987999977589988988755420378846998588089864320


Q ss_pred             HHHHHHHHH
Q ss_conf             999999998
Q gi|254781215|r  125 WAEVSKWLS  133 (511)
Q Consensus       125 w~Ei~k~~~  133 (511)
                       .++.+...
T Consensus       116 -~~~~~~~~  123 (245)
T 3dkp_A          116 -RELIKISE  123 (245)
T ss_dssp             -HHHHHHTT
T ss_pred             -HHHEECCC
T ss_conf             -12000122