HHsearch results for GI: 254781215 and protein with PDBid: 3fmp_B
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic transport, mRNA export, protein interaction; HET: ADP; 3.19A {Homo sapiens}
Probab=96.54 E-value=0.035 Score=31.00 Aligned_cols=77 Identities=17% Similarity=0.151 Sum_probs=48.1
Q ss_pred CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHH-HCCCCEEEEEECCHHHHHHHHH
Q ss_conf 557845899999999999874056555421012465025765978999999999998-0899669998085899999999
Q gi|254781215|r 47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMS-TRPGISVICLANSETQLKTTLW 125 (511)
Q Consensus 47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~-~~p~~kv~vtApt~~Q~~~ilw 125 (511)
+|..|.+-|++++..+-. +.++ -+-|.|..|+|||.....-++-.+. ...+.+++|.+||..-+.++ .
T Consensus 111 g~~~pt~iQ~~aip~il~----~~g~------dvlv~apTGSGKTlaf~lP~l~~l~~~~~~~~~lil~PtreLa~qi-~ 179 (479)
T 3fmp_B 111 GFNRPSKIQENALPLMLA----EPPQ------NLIAQSQSGTGKTAAFVLAMLSQVEPANKYPQCLCLSPTYELALQT-G 179 (479)
T ss_dssp TCCSCCHHHHHHHHHHTS----BSCC------EEEEECCSSSSHHHHHHHHHHTTCCTTSCSCCEEEECSSHHHHHHH-H
T ss_pred CCCCCCHHHHHHHHHHHH----CCCC------CEEEECCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHH-H
T ss_conf 999999999999999981----6899------5899848983799999999999763137886699994659999999-9
Q ss_pred HHHHHHHHH
Q ss_conf 999999985
Q gi|254781215|r 126 AEVSKWLSL 134 (511)
Q Consensus 126 ~Ei~k~~~~ 134 (511)
..+.+....
T Consensus 180 ~~~~~~~~~ 188 (479)
T 3fmp_B 180 KVIEQMGKF 188 (479)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHC
T ss_conf 999986302