HHsearch results for GI: 254781215 and protein with PDBid: 3iuy_A

>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomics consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=97.41  E-value=0.001  Score=40.69  Aligned_cols=71  Identities=21%  Similarity=0.200  Sum_probs=51.5

Q ss_pred             CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHH-------CCCCEEEEEECCHHH
Q ss_conf             5578458999999999998740565554210124650257659789999999999980-------899669998085899
Q gi|254781215|r   47 GFSAPRSWQLEFMEVVDAHCLNSVNNPNPEVFKGAISAGRGIGKTTLNAWLVLWLMST-------RPGISVICLANSETQ  119 (511)
Q Consensus        47 ~~~~P~~WQ~e~l~~i~~~~~~~~~~~~~~~~r~aV~sgrG~GKS~l~a~l~lw~l~~-------~p~~kv~vtApt~~Q  119 (511)
                      +|..|-+-|++.+..+-..    .        -+.|.|..|+|||.....-++..+..       ..+.++++.+||..-
T Consensus        39 g~~~pt~iQ~~aip~il~g----~--------dviv~a~TGsGKTlay~lp~l~~~~~~~~~~~~~~~~~alil~PtreL  106 (228)
T 3iuy_A           39 GILKPTPIQSQAWPIILQG----I--------DLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGMLVLTPTREL  106 (228)
T ss_dssp             TCCSCCHHHHHHHHHHHTT----C--------CEEEECCTTSCHHHHHHHHHHHHHC---------CCCSEEEECSSHHH
T ss_pred             CCCCCCHHHHHHHHHHHCC----C--------CEEEECCCCCCCCCHHHHHHHHHHHHCCCCHHCCCCCEEEEECCCHHH
T ss_conf             9999999999999999679----9--------889987899986366553289987620000001578549998285889


Q ss_pred             HHHHHHHHHHH
Q ss_conf             99999999999
Q gi|254781215|r  120 LKTTLWAEVSK  130 (511)
Q Consensus       120 ~~~ilw~Ei~k  130 (511)
                      +..+. .++.+
T Consensus       107 a~qi~-~~~~~  116 (228)
T 3iuy_A          107 ALHVE-AECSK  116 (228)
T ss_dssp             HHHHH-HHHHH
T ss_pred             HHHHH-HHHHH
T ss_conf             99999-99998