HHsearch alignment for GI: 254781217 and conserved domain: COG3415

>COG3415 Transposase and inactivated derivatives [DNA replication, recombination, and repair].

Probab=93.07  E-value=0.14  Score=31.39  Aligned_cols=45  Identities=24%  Similarity=0.562  Sum_probs=38.4

Q ss_pred             CHHCCHHHHHHHHHHH-HCCHHHHHHHHCCCCCHHHHHHHHHHCHH
Q ss_conf             1242999999999997-48957999972179997899999984819
Q gi|254781217|r    3 AHKYTKERIDNILASF-SGGLSLSQSCKKHGVTVVSFHGWVKQDRE   47 (162)
Q Consensus         3 ~~Kyt~el~d~Ic~~I-a~G~SLr~Ick~~gmp~~Tv~~Wl~kd~e   47 (162)
T Consensus         2 ~k~~s~~~R~~~~~~~~~~G~S~re~Ak~~gvs~sTvy~wv~r~~e   47 (138)
T COG3415           2 AKPFSNDLRERVVDAVVGEGLSCREAAKRFGVSISTVYRWVRRYRE   47 (138)
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHHCC
T ss_conf             8614789999999999976854999999969229999999987333