HHsearch alignment for GI: 254781217 and conserved domain: pfam01527

>pfam01527 Transposase_8 Transposase. Transposase proteins are necessary for efficient DNA transposition. This family consists of various E. coli insertion elements and other bacterial transposases some of which are members of the IS3 family.

Probab=96.47  E-value=0.005  Score=41.00  Aligned_cols=43  Identities=23%  Similarity=0.418  Sum_probs=39.2

Q ss_pred             CHHCCHHHHHHHHHHH-HCCHHHHHHHHCCCCCHHHHHHHHHHC
Q ss_conf             1242999999999997-489579999721799978999999848
Q gi|254781217|r    3 AHKYTKERIDNILASF-SGGLSLSQSCKKHGVTVVSFHGWVKQD   45 (162)
Q Consensus         3 ~~Kyt~el~d~Ic~~I-a~G~SLr~Ick~~gmp~~Tv~~Wl~kd   45 (162)
T Consensus         4 rrrys~efK~~~V~~~~~~g~sv~~var~~gi~~~~l~~W~k~~   47 (75)
T pfam01527         4 RRRYSEEFKARAVKESLEPGASVSELAREHGVSPATLYKWRKKY   47 (75)
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHH
T ss_conf             88899999999999998099849999999895999999999998