HHsearch results for GI: 254781217 and protein with PDBid: 1hlv_A

>1hlv_A CENP-B, major centromere autoantigen B; helix-turn-helix, protein-DNA complex, riken structural genomics/proteomics initiative, RSGI; 2.50A {Homo sapiens} SCOP: a.4.1.7 a.4.1.7 PDB: 1bw6_A
Probab=92.18  E-value=0.21  Score=28.90  Aligned_cols=49  Identities=8%  Similarity=0.133  Sum_probs=38.8

Q ss_pred             HCCHHHHHHHHHHHHCC--HHHHHHHHCCCCCHHHHHHHHHHCHHHHHHHHH
Q ss_conf             42999999999997489--579999721799978999999848199999999
Q gi|254781217|r    5 KYTKERIDNILASFSGG--LSLSQSCKKHGVTVVSFHGWVKQDREDLEKRYE   54 (162)
Q Consensus         5 Kyt~el~d~Ic~~Ia~G--~SLr~Ick~~gmp~~Tv~~Wl~kd~eef~e~Y~   54 (162)
                      .||.+.--+||+.+..|  .+.++|++..|+|.+|+.+|+... +.+...+.
T Consensus         7 ~~t~~~K~~vi~~~~~~~~~~~~~iAk~fgv~~sTi~~~~k~k-~~~~~~~~   57 (131)
T 1hlv_A            7 QLTFREKSRIIQEVEENPDLRKGEIARRFNIPPSTLSTILKNK-RAILASER   57 (131)
T ss_dssp             CCCHHHHHHHHHHHHHCTTSCHHHHHHHHTCCHHHHHHHHHTH-HHHHHHHH
T ss_pred             CCCHHHHHHHHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHH-HHHHHHHH
T ss_conf             1899999999999997788889999999891999999999247-99999997