HHsearch results for GI: 254781217 and protein with PDBid: 3hef_A
>3hef_A Gene 1 protein; bacteriophage SF6, terminase small subunit GP1, GP1 octameric assembly, GP1 channel, DNA recognition, DNA packaging; 1.65A {Enterobacteria phage SF6}
Probab=99.94 E-value=2.8e-26 Score=192.75 Aligned_cols=113 Identities=22% Similarity=0.459 Sum_probs=104.0
Q ss_pred HHCCHHHHHHHHHHHHCCHHHHHHHHCCCCC-HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCC
Q ss_conf 2429999999999974895799997217999-789999998481999999999999979999999998652026324204
Q gi|254781217|r 4 HKYTKERIDNILASFSGGLSLSQSCKKHGVT-VVSFHGWVKQDREDLEKRYEQAKQSHMEHLSENLASVVEAPLTEEERD 82 (162)
Q Consensus 4 ~Kyt~el~d~Ic~~Ia~G~SLr~Ick~~gmp-~~Tv~~Wl~kd~eef~e~Y~~Ar~~~ad~ladEileIad~~~~~~~~~ 82 (162)
.|||+++++.||++|++|.|++.||++.||| ++|||+|+.++ ++|+++|.+||+.+++.++|++++|++.+..
T Consensus 14 tk~t~e~~e~I~~~l~~G~sl~~i~~~~gvps~sT~~~Wl~~~-~ef~e~y~~Ar~~~~~~~~~~~~~i~~~~~~----- 87 (143)
T 3hef_A 14 SDYMPEVADDICSLLSSGESLLKVCKRPGMPDKSTVFRWLAKH-EDFRDKYAKATEARADSIFEEIFEIADNAIP----- 87 (143)
T ss_dssp CSCCHHHHHHHHHHHHTTCCHHHHHTSTTCCCHHHHHHHTTTC-HHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS-----
T ss_pred CCCCHHHHHHHHHHHHCCCCHHHHHHCCCCCCHHHHHHHHHHC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC-----
T ss_conf 6579999999999998898599998707999689999999718-9999999999999999999999999861024-----
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHCHHHHCCHHHHHHHCCHH
Q ss_conf 9899999999999999999875644401112334421025
Q gi|254781217|r 83 HPQAIKLRELRMKRLQWELEKRYRNVYGNHVSVEQKHTID 122 (162)
Q Consensus 83 ~~~~i~~~rl~id~~kW~asKl~Pk~YGdKv~vE~~~t~~ 122 (162)
+...++.+|+++++++|+|+||+|++||||+++|+++...
T Consensus 88 ~~~~~~~~r~~~~~~kw~l~kl~P~~ygdk~~~e~~g~~~ 127 (143)
T 3hef_A 88 DAAEVAKARLRVDTRKWALARMNPRKYGDKVTNELVGKDG 127 (143)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHSHHHHSCCEEEEEECGGG
T ss_pred CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
T ss_conf 6188888688899999999766830136564310367899