HHsearch alignment for GI: 254781218 and conserved domain: COG1356
>COG1356 tfx Transcriptional regulator [DNA replication, recombination and repair].
Probab=92.68 E-value=0.072 Score=31.38 Aligned_cols=47 Identities=19% Similarity=0.191 Sum_probs=32.3
Q ss_pred HHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHH---HHHHHHHHHCCCHH
Q ss_conf 9859988999998489999999887799888999---99999998289999
Q gi|254781218|r 41 KANNKTQKEMAIGANQLESAVNLFENGMCSTSIR---YALYLRNEYEISFD 88 (205)
Q Consensus 41 ~~~gltQ~elA~~~gis~~~is~~E~G~~~psi~---~l~~la~~~~vs~d 88 (205)
T Consensus 20 RekG~tQ~eIA~~L~TTraNvSaIEkrA~e-nIekarnTL~l~~~i~spv~ 69 (143)
T COG1356 20 REKGLTQSEIARILKTTRANVSAIEKRALE-NIEKARNTLLLWEQINSPVS 69 (143)
T ss_pred HHCCCCHHHHHHHHCCCCCCHHHHHHHHHH-HHHHHHHHHHHHHHHCCCEE
T ss_conf 640564899999975451017999999999-89999889999998469758