HHsearch alignment for GI: 254781218 and conserved domain: COG1396
>COG1396 HipB Predicted transcriptional regulators [Transcription].
Probab=98.10 E-value=2.1e-05 Score=53.14 Aligned_cols=65 Identities=26% Similarity=0.363 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCC-CCCHHHHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 99999999998599889999984899999998877998-889999999999828999996145322
Q gi|254781218|r 32 VGTRIKDIRKANNKTQKEMAIGANQLESAVNLFENGMC-STSIRYALYLRNEYEISFDWIYDGEVI 96 (205)
Q Consensus 32 iG~rik~lR~~~gltQ~elA~~~gis~~~is~~E~G~~-~psi~~l~~la~~~~vs~d~Ll~ge~~ 96 (205)
T Consensus 2 ~~~~~~~~r~~~~~s~~~~a~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (120)
T COG1396 2 IGERLKELRKKKGLSQEELAERLGVSRSTISRIERGRSESPSLELLARLAAALGVSLDELLEEEEE 67 (120)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf 789999999986999999998939889999999807877846999999999969789988400222