HHsearch alignment for GI: 254781218 and conserved domain: COG1396

>COG1396 HipB Predicted transcriptional regulators [Transcription].
Probab=98.10  E-value=2.1e-05  Score=53.14  Aligned_cols=65  Identities=26%  Similarity=0.363  Sum_probs=59.4

Q ss_pred             HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCC-CCCHHHHHHHHHHHCCCHHHHHCCCCC
Q ss_conf             99999999998599889999984899999998877998-889999999999828999996145322
Q gi|254781218|r   32 VGTRIKDIRKANNKTQKEMAIGANQLESAVNLFENGMC-STSIRYALYLRNEYEISFDWIYDGEVI   96 (205)
Q Consensus        32 iG~rik~lR~~~gltQ~elA~~~gis~~~is~~E~G~~-~psi~~l~~la~~~~vs~d~Ll~ge~~   96 (205)
T Consensus         2 ~~~~~~~~r~~~~~s~~~~a~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   67 (120)
T COG1396           2 IGERLKELRKKKGLSQEELAERLGVSRSTISRIERGRSESPSLELLARLAAALGVSLDELLEEEEE   67 (120)
T ss_pred             HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHH
T ss_conf             789999999986999999998939889999999807877846999999999969789988400222