HHsearch alignment for GI: 254781218 and conserved domain: COG1396
>COG1396 HipB Predicted transcriptional regulators [Transcription].
Probab=97.92 E-value=0.00011 Score=48.78 Aligned_cols=63 Identities=37% Similarity=0.560 Sum_probs=59.5
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCC-CCCHHHHHHHHHHHCCCHHHHHCCC
Q ss_conf 79999999997298389999997799999999741488-9998999999998289999952472
Q gi|254781218|r 114 IGARLKSIRKDKGMSQIEFGKLLGMPNSTLSNYEQGRT-IPEIKPARKIKQVTKKHLDWIYFGD 176 (205)
Q Consensus 114 iG~rLk~lR~~~glsq~elA~~lgis~~tis~~E~g~~-~Ps~~~l~kIa~~lgvs~d~L~~G~ 176 (205)
T Consensus 2 ~~~~~~~~r~~~~~s~~~~a~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 65 (120)
T COG1396 2 IGERLKELRKKKGLSQEELAERLGVSRSTISRIERGRSESPSLELLARLAAALGVSLDELLEEE 65 (120)
T ss_pred HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHHHH
T ss_conf 7899999999869999999989398899999998078778469999999999697899884002