HHsearch alignment for GI: 254781218 and conserved domain: COG1426
>COG1426 Predicted transcriptional regulator contains Xre-like HTH domain [Function unknown].
Probab=97.83 E-value=9.3e-05 Score=49.21 Aligned_cols=65 Identities=23% Similarity=0.250 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCC--CCH----HHHHHHHHHHCCCHHHHHCCCC
Q ss_conf 7799999999972983899999977999999997414889--998----9999999982899999524721
Q gi|254781218|r 113 AIGARLKSIRKDKGMSQIEFGKLLGMPNSTLSNYEQGRTI--PEI----KPARKIKQVTKKHLDWIYFGDE 177 (205)
Q Consensus 113 ~iG~rLk~lR~~~glsq~elA~~lgis~~tis~~E~g~~~--Ps~----~~l~kIa~~lgvs~d~L~~G~e 177 (205)
T Consensus 3 ~~Ge~Lr~~Re~~gLsL~dva~~t~I~~~~L~aiEeg~~~~lp~~~y~rG~ir~YA~~l~ld~~~l~~~~~ 73 (284)
T COG1426 3 TLGERLRQAREEKGLSLEDVAARTKIRKSYLRALEEGNFDKLPGPVYIRGYIRSYAKFLGLDEDELLQAFE 73 (284)
T ss_pred CHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHH
T ss_conf 77899999999849999999988577599999986677010641576789999999996899899999864