HHsearch alignment for GI: 254781218 and conserved domain: COG2973
>COG2973 TrpR Trp operon repressor [Transcription].
Probab=93.85 E-value=0.29 Score=27.67 Aligned_cols=64 Identities=19% Similarity=0.298 Sum_probs=46.4
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 100015668999999999999999985--9988999998489999999887799888999999999982
Q gi|254781218|r 17 YTLIITPEIRQYWKDVGTRIKDIRKAN--NKTQKEMAIGANQLESAVNLFENGMCSTSIRYALYLRNEY 83 (205)
Q Consensus 17 ~~~~~~~~~~~~~~~iG~rik~lR~~~--gltQ~elA~~~gis~~~is~~E~G~~~psi~~l~~la~~~ 83 (205)
T Consensus 34 L~llLTpd---EReal~~Rv~Iv~eLL~ge~sQREi~~~LgvsiAtITRGSN~LK~~~~~~k~~L~~~l 99 (103)
T COG2973 34 LTLLLTPD---EREALGTRVRIVEELLRGELSQREIAQKLGVSIATITRGSNSLKTADPEFKQWLEKVL 99 (103)
T ss_pred HHHHCCHH---HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCHHHHCCCCHHHHHHHHHHH
T ss_conf 99976876---8999999999999999563539999998586256550444442359878999999973