HHsearch alignment for GI: 254781218 and conserved domain: COG2973

>COG2973 TrpR Trp operon repressor [Transcription].
Probab=93.85  E-value=0.29  Score=27.67  Aligned_cols=64  Identities=19%  Similarity=0.298  Sum_probs=46.4

Q ss_pred             HHHCCCHHHHHHHHHHHHHHHHHHHHC--CCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             100015668999999999999999985--9988999998489999999887799888999999999982
Q gi|254781218|r   17 YTLIITPEIRQYWKDVGTRIKDIRKAN--NKTQKEMAIGANQLESAVNLFENGMCSTSIRYALYLRNEY   83 (205)
Q Consensus        17 ~~~~~~~~~~~~~~~iG~rik~lR~~~--gltQ~elA~~~gis~~~is~~E~G~~~psi~~l~~la~~~   83 (205)
T Consensus        34 L~llLTpd---EReal~~Rv~Iv~eLL~ge~sQREi~~~LgvsiAtITRGSN~LK~~~~~~k~~L~~~l   99 (103)
T COG2973          34 LTLLLTPD---EREALGTRVRIVEELLRGELSQREIAQKLGVSIATITRGSNSLKTADPEFKQWLEKVL   99 (103)
T ss_pred             HHHHCCHH---HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHCCCHHHHCCCCHHHHHHHHHHH
T ss_conf             99976876---8999999999999999563539999998586256550444442359878999999973