HHsearch alignment for GI: 254781218 and conserved domain: COG3620
>COG3620 Predicted transcriptional regulator with C-terminal CBS domains [Transcription].
Probab=98.90 E-value=7.9e-09 Score=74.36 Aligned_cols=101 Identities=21% Similarity=0.289 Sum_probs=74.5
Q ss_pred HHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHC------CCHHHHHCCCCCCCCCCCCCCHH
Q ss_conf 999999998599889999984899999998877998889999999999828------99999614532210000232134
Q gi|254781218|r 34 TRIKDIRKANNKTQKEMAIGANQLESAVNLFENGMCSTSIRYALYLRNEYE------ISFDWIYDGEVIDRRYEDVTNKK 107 (205)
Q Consensus 34 ~rik~lR~~~gltQ~elA~~~gis~~~is~~E~G~~~psi~~l~~la~~~~------vs~d~Ll~ge~~~~~~~~~~~~~ 107 (205)
T Consensus 8 edlrk~Rk~LGitQ~dLA~~aGVSQ~~IArlE~G~vdPrlSt~k~Il~aL~e~e~~~ita~~iM~spvv~v~pdDs---- 83 (187)
T COG3620 8 EDLRKRRKELGITQKDLARRAGVSQPYIARLEAGKVDPRLSTVKRILEALEEAEKTRITAKTIMHSPVVSVSPDDS---- 83 (187)
T ss_pred HHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCEEEHHHHCCCCEEEECCHHH----
T ss_conf 9999999875977899998708648889998638879308999999999998546667576653587058772466----
Q ss_pred HHHHHHHHHHHHHHHHHCCCCHHHHHHH---HC-CCHHHHHH
Q ss_conf 5546777999999999729838999999---77-99999999
Q gi|254781218|r 108 RLDPYAIGARLKSIRKDKGMSQIEFGKL---LG-MPNSTLSN 145 (205)
Q Consensus 108 ~~d~~~iG~rLk~lR~~~glsq~elA~~---lg-is~~tis~ 145 (205)
T Consensus 84 ------i-~~vv~lM~~~g~SQlPVi~~~k~VGsItE~~iv~ 118 (187)
T COG3620 84 ------I-SDVVNLMRDKGISQLPVIEEDKVVGSITENDIVR 118 (187)
T ss_pred ------H-HHHHHHHHHCCCCCCCEEECCEEEEEECHHHHHH
T ss_conf ------9-9999999975975275410886453314989999