HHsearch alignment for GI: 254781218 and conserved domain: COG4800

>COG4800 Predicted transcriptional regulator with an HTH domain [Transcription].

Probab=97.20  E-value=0.0019  Score=41.17  Aligned_cols=59  Identities=17%  Similarity=0.085  Sum_probs=49.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             689999999999999999859988999998489999999887799888999999999982
Q gi|254781218|r   24 EIRQYWKDVGTRIKDIRKANNKTQKEMAIGANQLESAVNLFENGMCSTSIRYALYLRNEY   83 (205)
Q Consensus        24 ~~~~~~~~iG~rik~lR~~~gltQ~elA~~~gis~~~is~~E~G~~~psi~~l~~la~~~   83 (205)
T Consensus         9 ~~ies~E~F~~~l~~~l~Elglt~~eFak~anIP~StLYKil~G-~dpr~~tl~~I~kti   67 (170)
T COG4800           9 ECIESGEDFGSCLQKLLDELGLTPSEFAKRANIPLSTLYKILKG-SDPRYDTLTRIFKTI   67 (170)
T ss_pred             HHHHCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHC-CCCCHHHHHHHHHHH
T ss_conf             99964007999999999981999899988709989999999817-996577899999999