HHsearch alignment for GI: 254781218 and conserved domain: PHA01976

>PHA01976 helix-turn-helix protein.
Probab=99.61  E-value=2.5e-15  Score=114.53  Aligned_cols=63  Identities=19%  Similarity=0.398  Sum_probs=60.5

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCC
Q ss_conf             779999999997298389999997799999999741488999899999999828999995247
Q gi|254781218|r  113 AIGARLKSIRKDKGMSQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKIKQVTKKHLDWIYFG  175 (205)
Q Consensus       113 ~iG~rLk~lR~~~glsq~elA~~lgis~~tis~~E~g~~~Ps~~~l~kIa~~lgvs~d~L~~G  175 (205)
T Consensus         2 ~F~~RL~~lR~~~g~sQ~eLA~~lGVs~~~is~wE~g~~~P~~d~L~~la~~~~VS~D~LlGr   64 (67)
T PHA01976          2 SFAIQLIKARNARAWSAPELSRRAGVRHSLIYDFEADKRLPNLKTLLRLADALGVTLDWLCGR   64 (67)
T ss_pred             CHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCC
T ss_conf             789999999998699999999994998999999987898999899999999979789999267