HHsearch alignment for GI: 254781218 and conserved domain: PRK01381
>PRK01381 Trp operon repressor; Provisional.
Probab=91.93 E-value=0.38 Score=26.88 Aligned_cols=64 Identities=17% Similarity=0.276 Sum_probs=44.7
Q ss_pred HHHCCCHHHHHHHHHHHHHHHHHHH-HCC-CCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 1000156689999999999999999-859-988999998489999999887799888999999999982
Q gi|254781218|r 17 YTLIITPEIRQYWKDVGTRIKDIRK-ANN-KTQKEMAIGANQLESAVNLFENGMCSTSIRYALYLRNEY 83 (205)
Q Consensus 17 ~~~~~~~~~~~~~~~iG~rik~lR~-~~g-ltQ~elA~~~gis~~~is~~E~G~~~psi~~l~~la~~~ 83 (205)
T Consensus 29 l~~lLTp~---Er~al~~R~~I~~~Ll~ge~sQReIa~~lgvsiAtITRGSn~LK~~~~~~k~~l~~~l 94 (99)
T PRK01381 29 LTLLLTPD---EREALGTRVRIVEELLRGELSQREIKQELGVGIATITRGSNSLKTAPPEFKEWLEQLL 94 (99)
T ss_pred HHHHCCHH---HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCEECCCCHHHHHCCCHHHHHHHHHHH
T ss_conf 99978999---9999999999999999487649999998497402000026988539999999999986