HHsearch alignment for GI: 254781218 and conserved domain: PRK09492
>PRK09492 treR trehalose repressor; Provisional.
Probab=94.61 E-value=0.09 Score=30.77 Aligned_cols=48 Identities=23% Similarity=0.004 Sum_probs=37.4
Q ss_pred HCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHH---HHHHHHHCCCHHH
Q ss_conf 85998899999848999999988779988899999---9999982899999
Q gi|254781218|r 42 ANNKTQKEMAIGANQLESAVNLFENGMCSTSIRYA---LYLRNEYEISFDW 89 (205)
Q Consensus 42 ~~gltQ~elA~~~gis~~~is~~E~G~~~psi~~l---~~la~~~~vs~d~ 89 (205)
T Consensus 2 ~kkvTikDIA~~aGVS~aTVSrvLn~~~~vs~eTr~rV~~~a~elgY~Pn~ 52 (315)
T PRK09492 2 QNKLTIKDIARLSGVGKSTVSRVLNNEPKVSPRTRERVEAVINQHGFSPSK 52 (315)
T ss_pred CCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCCH
T ss_conf 898879999999897999999997898999999999999999996998077