HHsearch alignment for GI: 254781218 and conserved domain: PRK09492

>PRK09492 treR trehalose repressor; Provisional.
Probab=94.32  E-value=0.12  Score=29.98  Aligned_cols=45  Identities=11%  Similarity=0.110  Sum_probs=23.2

Q ss_pred             CCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH---HHHHCCCHH
Q ss_conf             983899999977999999997414889998999999---998289999
Q gi|254781218|r  126 GMSQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKI---KQVTKKHLD  170 (205)
Q Consensus       126 glsq~elA~~lgis~~tis~~E~g~~~Ps~~~l~kI---a~~lgvs~d  170 (205)
T Consensus         4 kvTikDIA~~aGVS~aTVSrvLn~~~~vs~eTr~rV~~~a~elgY~Pn   51 (315)
T PRK09492          4 KLTIKDIARLSGVGKSTVSRVLNNEPKVSPRTRERVEAVINQHGFSPS   51 (315)
T ss_pred             CCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf             887999999989799999999789899999999999999999699807