HHsearch alignment for GI: 254781218 and conserved domain: PRK09492
>PRK09492 treR trehalose repressor; Provisional.
Probab=94.32 E-value=0.12 Score=29.98 Aligned_cols=45 Identities=11% Similarity=0.110 Sum_probs=23.2
Q ss_pred CCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHH---HHHHCCCHH
Q ss_conf 983899999977999999997414889998999999---998289999
Q gi|254781218|r 126 GMSQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKI---KQVTKKHLD 170 (205)
Q Consensus 126 glsq~elA~~lgis~~tis~~E~g~~~Ps~~~l~kI---a~~lgvs~d 170 (205)
T Consensus 4 kvTikDIA~~aGVS~aTVSrvLn~~~~vs~eTr~rV~~~a~elgY~Pn 51 (315)
T PRK09492 4 KLTIKDIARLSGVGKSTVSRVLNNEPKVSPRTRERVEAVINQHGFSPS 51 (315)
T ss_pred CCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 887999999989799999999789899999999999999999699807