HHsearch alignment for GI: 254781218 and conserved domain: PRK09943
>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional.
Probab=99.51 E-value=6.9e-14 Score=105.61 Aligned_cols=67 Identities=31% Similarity=0.430 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCC
Q ss_conf 7779999999997298389999997799999999741488999899999999828999995247210
Q gi|254781218|r 112 YAIGARLKSIRKDKGMSQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKIKQVTKKHLDWIYFGDEV 178 (205)
Q Consensus 112 ~~iG~rLk~lR~~~glsq~elA~~lgis~~tis~~E~g~~~Ps~~~l~kIa~~lgvs~d~L~~G~e~ 178 (205)
T Consensus 6 ~~iG~rIr~lR~~~glTL~eLA~~sGvS~s~LSqIErg~~~PSl~tL~kIa~aL~v~l~~lf~~~~~ 72 (185)
T PRK09943 6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEK 72 (185)
T ss_pred HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCC
T ss_conf 2488999999998599899999887969999999987999999999999999849999998277455