HHsearch alignment for GI: 254781218 and conserved domain: PRK09943

>PRK09943 DNA-binding transcriptional repressor PuuR; Provisional.
Probab=99.51  E-value=6.9e-14  Score=105.61  Aligned_cols=67  Identities=31%  Similarity=0.430  Sum_probs=63.5

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCC
Q ss_conf             7779999999997298389999997799999999741488999899999999828999995247210
Q gi|254781218|r  112 YAIGARLKSIRKDKGMSQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKIKQVTKKHLDWIYFGDEV  178 (205)
Q Consensus       112 ~~iG~rLk~lR~~~glsq~elA~~lgis~~tis~~E~g~~~Ps~~~l~kIa~~lgvs~d~L~~G~e~  178 (205)
T Consensus         6 ~~iG~rIr~lR~~~glTL~eLA~~sGvS~s~LSqIErg~~~PSl~tL~kIa~aL~v~l~~lf~~~~~   72 (185)
T PRK09943          6 LAPGKRLSEIRQQQGLSQRRAAELSGLTHSAISTIEQDKVSPAISTLQKLLKVYGLSLSEFFSEPEK   72 (185)
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCCCC
T ss_conf             2488999999998599899999887969999999987999999999999999849999998277455