HHsearch alignment for GI: 254781218 and conserved domain: PRK10014
>PRK10014 DNA-binding transcriptional repressor MalI; Provisional.
Probab=94.60 E-value=0.075 Score=31.27 Aligned_cols=48 Identities=21% Similarity=0.115 Sum_probs=37.8
Q ss_pred HHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHH---HHHHHHHCCCHH
Q ss_conf 985998899999848999999988779988899999---999998289999
Q gi|254781218|r 41 KANNKTQKEMAIGANQLESAVNLFENGMCSTSIRYA---LYLRNEYEISFD 88 (205)
Q Consensus 41 ~~~gltQ~elA~~~gis~~~is~~E~G~~~psi~~l---~~la~~~~vs~d 88 (205)
T Consensus 3 ~~kkvTi~dIA~~aGVS~aTVSrvLn~~~~Vs~eTr~rV~~aa~elgY~pn 53 (342)
T PRK10014 3 TAKKITIHDVALAAGVSVSTVSLVLSGKGRISTATGERVNQAIEELGFVRN 53 (342)
T ss_pred CCCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCCC
T ss_conf 999887999999989699999999779899999999999999999489978