HHsearch alignment for GI: 254781218 and conserved domain: PRK11303
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional.
Probab=93.63 E-value=0.17 Score=29.00 Aligned_cols=46 Identities=15% Similarity=0.090 Sum_probs=35.4
Q ss_pred CCHHHHHHHHCCCHHHHHHHHCCCCC---CC---HHHHHHHHHHHCCCHHHH
Q ss_conf 98899999848999999988779988---89---999999999828999996
Q gi|254781218|r 45 KTQKEMAIGANQLESAVNLFENGMCS---TS---IRYALYLRNEYEISFDWI 90 (205)
Q Consensus 45 ltQ~elA~~~gis~~~is~~E~G~~~---ps---i~~l~~la~~~~vs~d~L 90 (205)
T Consensus 1 vTikDVA~~AGVS~aTVSrvLNg~~~~~~Vs~~Tr~rV~~aa~eLgY~Pn~~ 52 (330)
T PRK11303 1 MKLDEIARLAGVSRTTASYVINGKAKQYRISDKTVEKVMAVVREHNYHPNAV 52 (330)
T ss_pred CCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHH
T ss_conf 9789999997979989988838999888769999999999999968994888