HHsearch alignment for GI: 254781218 and conserved domain: PRK11303

>PRK11303 DNA-binding transcriptional regulator FruR; Provisional.
Probab=93.63  E-value=0.17  Score=29.00  Aligned_cols=46  Identities=15%  Similarity=0.090  Sum_probs=35.4

Q ss_pred             CCHHHHHHHHCCCHHHHHHHHCCCCC---CC---HHHHHHHHHHHCCCHHHH
Q ss_conf             98899999848999999988779988---89---999999999828999996
Q gi|254781218|r   45 KTQKEMAIGANQLESAVNLFENGMCS---TS---IRYALYLRNEYEISFDWI   90 (205)
Q Consensus        45 ltQ~elA~~~gis~~~is~~E~G~~~---ps---i~~l~~la~~~~vs~d~L   90 (205)
T Consensus         1 vTikDVA~~AGVS~aTVSrvLNg~~~~~~Vs~~Tr~rV~~aa~eLgY~Pn~~   52 (330)
T PRK11303          1 MKLDEIARLAGVSRTTASYVINGKAKQYRISDKTVEKVMAVVREHNYHPNAV   52 (330)
T ss_pred             CCHHHHHHHHCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCHH
T ss_conf             9789999997979989988838999888769999999999999968994888