HHsearch alignment for GI: 254781218 and conserved domain: TIGR02612
>TIGR02612 mob_myst_A mobile mystery protein A; InterPro: IPR013435 Proteins in this entry are more often encoded within mobilisation-related contexts than not. This includes a CRISPR-associated gene region in Geobacter sulfurreducens PCA, and plasmids in Agrobacterium tumefaciens and Coxiella burnetii. They are found together with mobile mystery protein B, a member of the Fic protein family (IPR003812 from INTERPRO). Mobile mystery protein A is encoded by the upstream member of the gene pair and contains a helix-turn-helix domain..
Probab=97.86 E-value=2.9e-05 Score=52.30 Aligned_cols=56 Identities=14% Similarity=0.221 Sum_probs=31.8
Q ss_pred HHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCC--CCCCHHHHHHHHHHHCCCHHHHH
Q ss_conf 999999859988999998489999999887799--88899999999998289999961
Q gi|254781218|r 36 IKDIRKANNKTQKEMAIGANQLESAVNLFENGM--CSTSIRYALYLRNEYEISFDWIY 91 (205)
Q Consensus 36 ik~lR~~~gltQ~elA~~~gis~~~is~~E~G~--~~psi~~l~~la~~~~vs~d~Ll 91 (205)
T Consensus 30 vR~~R~ALGms~~QLA~RlGV~p~Rv~~~E~~E~~G~VTL~tlr~aAEAl~C~FVYaf 87 (150)
T TIGR02612 30 VRAIRKALGMSGAQLAARLGVTPQRVEAIEKSELSGAVTLKTLRKAAEALDCTFVYAF 87 (150)
T ss_pred HHHHHHHHCCCHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCEEEEEC
T ss_conf 6889877251578876652897377999888875553558889999998598443401