HHsearch alignment for GI: 254781218 and conserved domain: pfam00157
>pfam00157 Pou Pou domain - N-terminal to homeobox domain.
Probab=91.16 E-value=0.35 Score=27.09 Aligned_cols=51 Identities=24% Similarity=0.361 Sum_probs=39.3
Q ss_pred HHHHHHHHHHHHCCCCHHHHHHHHC------CCHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 7799999999972983899999977------9999999974148899989999999982
Q gi|254781218|r 113 AIGARLKSIRKDKGMSQIEFGKLLG------MPNSTLSNYEQGRTIPEIKPARKIKQVT 165 (205)
Q Consensus 113 ~iG~rLk~lR~~~glsq~elA~~lg------is~~tis~~E~g~~~Ps~~~l~kIa~~l 165 (205)
T Consensus 11 ~Fa~~fk~rRi~LG~TQ~dVg~al~~l~G~~~SQttIcRFE~l~--Ls~kn~~kLkP~L 67 (75)
T pfam00157 11 QFAKEFKQRRIKLGYTQADVGLALGALYGPVFSQTTICRFEALQ--LSFKNMCKLKPLL 67 (75)
T ss_pred HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC--CCHHHHHHHHHHH
T ss_conf 99999999898737759999999998708654235888888504--4799899889999