HHsearch alignment for GI: 254781218 and conserved domain: pfam00157

>pfam00157 Pou Pou domain - N-terminal to homeobox domain.
Probab=91.16  E-value=0.35  Score=27.09  Aligned_cols=51  Identities=24%  Similarity=0.361  Sum_probs=39.3

Q ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHC------CCHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             7799999999972983899999977------9999999974148899989999999982
Q gi|254781218|r  113 AIGARLKSIRKDKGMSQIEFGKLLG------MPNSTLSNYEQGRTIPEIKPARKIKQVT  165 (205)
Q Consensus       113 ~iG~rLk~lR~~~glsq~elA~~lg------is~~tis~~E~g~~~Ps~~~l~kIa~~l  165 (205)
T Consensus        11 ~Fa~~fk~rRi~LG~TQ~dVg~al~~l~G~~~SQttIcRFE~l~--Ls~kn~~kLkP~L   67 (75)
T pfam00157        11 QFAKEFKQRRIKLGYTQADVGLALGALYGPVFSQTTICRFEALQ--LSFKNMCKLKPLL   67 (75)
T ss_pred             HHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC--CCHHHHHHHHHHH
T ss_conf             99999999898737759999999998708654235888888504--4799899889999