HHsearch alignment for GI: 254781218 and conserved domain: smart00352
>smart00352 POU Found in Pit-Oct-Unc transcription factors.
Probab=95.72 E-value=0.022 Score=34.57 Aligned_cols=53 Identities=15% Similarity=0.108 Sum_probs=38.2
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHC------CCHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf 999999999999985998899999848------9999999887799888999999999982
Q gi|254781218|r 29 WKDVGTRIKDIRKANNKTQKEMAIGAN------QLESAVNLFENGMCSTSIRYALYLRNEY 83 (205)
Q Consensus 29 ~~~iG~rik~lR~~~gltQ~elA~~~g------is~~~is~~E~G~~~psi~~l~~la~~~ 83 (205)
T Consensus 9 le~Fa~~fk~rRi~LG~TQ~dVG~aL~~l~g~~~SQttIcRFE~l~--LS~kn~~kLkPiL 67 (75)
T smart00352 9 LEAFAKTFKQRRIKLGFTQADVGLALGALYGPDFSQTTICRFEALQ--LSFKNMCKLKPLL 67 (75)
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC--CCHHHHHHHHHHH
T ss_conf 9999999999898737759999999998618643146888988605--4798899889999