HHsearch alignment for GI: 254781218 and conserved domain: smart00352

>smart00352 POU Found in Pit-Oct-Unc transcription factors.
Probab=93.08  E-value=0.15  Score=29.34  Aligned_cols=52  Identities=25%  Similarity=0.362  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHC------CCHHHHHHHHCCCCCCCHHHHHHHHHHH
Q ss_conf             77799999999972983899999977------9999999974148899989999999982
Q gi|254781218|r  112 YAIGARLKSIRKDKGMSQIEFGKLLG------MPNSTLSNYEQGRTIPEIKPARKIKQVT  165 (205)
Q Consensus       112 ~~iG~rLk~lR~~~glsq~elA~~lg------is~~tis~~E~g~~~Ps~~~l~kIa~~l  165 (205)
T Consensus        10 e~Fa~~fk~rRi~LG~TQ~dVG~aL~~l~g~~~SQttIcRFE~l~--LS~kn~~kLkPiL   67 (75)
T smart00352       10 EAFAKTFKQRRIKLGFTQADVGLALGALYGPDFSQTTICRFEALQ--LSFKNMCKLKPLL   67 (75)
T ss_pred             HHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCC--CCHHHHHHHHHHH
T ss_conf             999999999898737759999999998618643146888988605--4798899889999