HHsearch results for GI: 254781218 and protein with PDBid: 2r1j_L
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=99.61 E-value=1.6e-15 Score=114.43 Aligned_cols=63 Identities=21% Similarity=0.256 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCC
Q ss_conf 999999999985998899999848999999988779988899999999998289999961453
Q gi|254781218|r 32 VGTRIKDIRKANNKTQKEMAIGANQLESAVNLFENGMCSTSIRYALYLRNEYEISFDWIYDGE 94 (205)
Q Consensus 32 iG~rik~lR~~~gltQ~elA~~~gis~~~is~~E~G~~~psi~~l~~la~~~~vs~d~Ll~ge 94 (205)
||+|||.+|+.+||||++||+.+|+++++|++||+|...|+++.+.+||++|+|+++||+.||
T Consensus 6 ig~rlr~~R~~~glsq~~la~~~gvs~~~i~~~e~g~~~p~~~~l~~la~~l~v~~~~ll~gd 68 (68)
T 2r1j_L 6 MGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGD 68 (68)
T ss_dssp HHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCBHHHHHHHHHHTTSCHHHHHHCC
T ss_pred HHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCC
T ss_conf 999999999985999999988739999999999879989999999999999799799985878