HHsearch results for GI: 254781218 and protein with PDBid: 2r1j_L
>2r1j_L Repressor protein C2; protein-DNA complex, helix-turn-helix, DNA-binding, transcription, transcription regulation; 1.53A {Enterobacteria phage P22} SCOP: a.35.1.2 PDB: 3jxb_C 3jxc_L 3jxd_L
Probab=99.59 E-value=1.9e-15 Score=113.96 Aligned_cols=66 Identities=24% Similarity=0.445 Sum_probs=63.6
Q ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCC
Q ss_conf 677799999999972983899999977999999997414889998999999998289999952472
Q gi|254781218|r 111 PYAIGARLKSIRKDKGMSQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKIKQVTKKHLDWIYFGD 176 (205)
Q Consensus 111 ~~~iG~rLk~lR~~~glsq~elA~~lgis~~tis~~E~g~~~Ps~~~l~kIa~~lgvs~d~L~~G~ 176 (205)
...+|+|||.+|+.+||||.+||+.+|++++++++||+|++.|+.+.+.+||++|+|+++||++||
T Consensus 3 ~~~ig~rlr~~R~~~glsq~~la~~~gvs~~~i~~~e~g~~~p~~~~l~~la~~l~v~~~~ll~gd 68 (68)
T 2r1j_L 3 TQLMGERIRARRKKLKIRQAALGKMVGVSNVAISQWERSETEPNGENLLALSKALQCSPDYLLKGD 68 (68)
T ss_dssp CCCHHHHHHHHHHHHTCCHHHHHHHHTSCHHHHHHHHTTSSCCBHHHHHHHHHHTTSCHHHHHHCC
T ss_pred HHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHHHCCC
T ss_conf 899999999999985999999988739999999999879989999999999999799799985878