PSIBLAST alignment of GI: 254781218 and protein with PDB id: 1y9q

>gi|60594530|pdb|1Y9Q|A Chain A, Crystal Structure Of Hth_3 Family Transcriptional Regulator From Vibrio Cholerae Length = 192

 Score = 58.0 bits (139), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 16/68 (23%), Positives = 30/68 (44%)

Query: 116 ARLKSIRKDKGMSQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKIKQVTKKHLDWIYFG 175
            +LK++RK +G+S     +L G+  + L   E+G + P I    KI    +      +  
Sbjct: 14  NQLKNLRKSRGLSLDATAQLTGVSKAXLGQIERGESSPTIATLWKIASGLEASFSAFFAN 73

Query: 176 DEVIVPKS 183
           D  ++   
Sbjct: 74  DPQLLSSE 81