RPSBLAST alignment of GI: 254781218 and protein with PDBid: 3fmy

>3fmy_A HTH-type transcriptional regulator MQSA (YGIT/B3021); helix-turn-helix, DNA-binding, transcription regulation, DNA binding protein; HET: MEQ; 1.40A {Escherichia coli k-12} Length = 73
 Score = 50.6 bits (121), Expect = 3e-07
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 114 IGARLKSIRKDKGMSQIEFGKLLGMPNSTLSNYEQGRTIPEIKPARKIKQVTKKHLDWI 172
               +  +RK   ++Q E  ++ G   +  S YE+G   P      K+ +V  KH + +
Sbjct: 12  APEFIVKVRKKLSLTQKEASEIFGGGVNAFSRYEKGNAXPH-PSTIKLLRVLDKHPELL 69