RPSBLAST alignment of GI: 254781218 and protein with PDBid: 3ivp

>3ivp_A Putative transposon-related DNA-binding protein; APC62618, structural genomics, PSI-2, protein structure initiative; HET: PG4; 2.02A {Clostridium difficile 630} Length = 126

 Score = 39.7 bits (92), Expect = 5e-04
 Identities = 13/71 (18%), Positives = 28/71 (39%)

Query: 24 EIRQYWKDVGTRIKDIRKANNKTQKEMAIGANQLESAVNLFENGMCSTSIRYALYLRNEY 83
          E +  ++ +G  IK+ RK    T++++          +   EN     S++    L +  
Sbjct: 5  EDKYDFRALGLAIKEARKKQGLTREQVGAMIEIDPRYLTNIENKGQHPSLQVLYDLVSLL 64

Query: 84 EISFDWIYDGE 94
           +S D  +   
Sbjct: 65 NVSVDEFFLPA 75