HHsearch alignment for GI: 254781223 and conserved domain: COG1208
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis].
Probab=99.13 E-value=2e-10 Score=59.97 Aligned_cols=102 Identities=16% Similarity=0.291 Sum_probs=54.3
Q ss_pred EEECCCEEECCCCEECCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf 69889709928839979815457543231122222221001135520221111222110112222211011111111243
Q gi|254781223|r 5 AVVRDCATVIDDARVSGNASVSRFAQVKSNAEVSDNTYVRDNAKVGGYAKVSGNASVGGNAIVRDTAEVGGDAFVIGFTV 84 (110)
Q Consensus 5 ~~I~~~a~I~~~~~I~~n~~I~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~~~~~~~i~~~~~i~~~~~ 84 (110)
T Consensus 256 ~~i~gp~~ig~~~~i~~~~~i~~~~~ig~~~~I~~~~~i-~~Sii~~~~~i~~~~~i-~~sIi~~~~~ig~~~~i~d-~~ 332 (358)
T COG1208 256 AYIIGPVVIGPGAKIGPGALIGPYTVIGEGVTIGNGVEI-KNSIIMDNVVIGHGSYI-GDSIIGENCKIGASLIIGD-VV 332 (358)
T ss_pred EEEECCEEECCCCEECCCCEECCCCEECCCCEECCCCEE-EEEEEECCCEECCCCEE-CCEEECCCCEECCCCEEEE-EE
T ss_conf 388589498269789888486898789999888998778-75488778798888888-2069818859998615701-58
Q ss_pred CCCCEEECCCEEECCCCEECCCEEE
Q ss_conf 2201397498499888899698097
Q gi|254781223|r 85 ISGNARVRGNAVVGGDTVVEGDTVL 109 (110)
Q Consensus 85 I~~~~~I~~~~~I~~~~~I~~~~~i 109 (110)
T Consensus 333 ~g~~~~i~~g~~~~~~~~~~~~~~~ 357 (358)
T COG1208 333 IGINSEILPGVVVGPGSVVESGEIE 357 (358)
T ss_pred ECCCEEECCCEEECCCCCCCCCCCC
T ss_conf 6366086276184786061576303