HHsearch alignment for GI: 254781223 and conserved domain: COG1208

>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis].
Probab=99.13  E-value=2e-10  Score=59.97  Aligned_cols=102  Identities=16%  Similarity=0.291  Sum_probs=54.3

Q ss_pred             EEECCCEEECCCCEECCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
Q ss_conf             69889709928839979815457543231122222221001135520221111222110112222211011111111243
Q gi|254781223|r    5 AVVRDCATVIDDARVSGNASVSRFAQVKSNAEVSDNTYVRDNAKVGGYAKVSGNASVGGNAIVRDTAEVGGDAFVIGFTV   84 (110)
Q Consensus         5 ~~I~~~a~I~~~~~I~~n~~I~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~~~~~~~i~~~~~i~~~~~   84 (110)
T Consensus       256 ~~i~gp~~ig~~~~i~~~~~i~~~~~ig~~~~I~~~~~i-~~Sii~~~~~i~~~~~i-~~sIi~~~~~ig~~~~i~d-~~  332 (358)
T COG1208         256 AYIIGPVVIGPGAKIGPGALIGPYTVIGEGVTIGNGVEI-KNSIIMDNVVIGHGSYI-GDSIIGENCKIGASLIIGD-VV  332 (358)
T ss_pred             EEEECCEEECCCCEECCCCEECCCCEECCCCEECCCCEE-EEEEEECCCEECCCCEE-CCEEECCCCEECCCCEEEE-EE
T ss_conf             388589498269789888486898789999888998778-75488778798888888-2069818859998615701-58


Q ss_pred             CCCCEEECCCEEECCCCEECCCEEE
Q ss_conf             2201397498499888899698097
Q gi|254781223|r   85 ISGNARVRGNAVVGGDTVVEGDTVL  109 (110)
Q Consensus        85 I~~~~~I~~~~~I~~~~~I~~~~~i  109 (110)
T Consensus       333 ~g~~~~i~~g~~~~~~~~~~~~~~~  357 (358)
T COG1208         333 IGINSEILPGVVVGPGSVVESGEIE  357 (358)
T ss_pred             ECCCEEECCCEEECCCCCCCCCCCC
T ss_conf             6366086276184786061576303