HHsearch alignment for GI: 254781223 and conserved domain: COG1208

>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis].
Probab=98.89  E-value=3.9e-09  Score=54.60  Aligned_cols=91  Identities=12%  Similarity=0.168  Sum_probs=52.2

Q ss_pred             EEECCCCEECCCCEECCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEE
Q ss_conf             09928839979815457543231122222221001135520221111222110112222211011111111243220139
Q gi|254781223|r   11 ATVIDDARVSGNASVSRFAQVKSNAEVSDNTYVRDNAKVGGYAKVSGNASVGGNAIVRDTAEVGGDAFVIGFTVISGNAR   90 (110)
Q Consensus        11 a~I~~~~~I~~n~~I~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~i~~~~~~~~~~~i~~~~~i~~~~~I~~~~~   90 (110)
T Consensus       256 ~~i~gp~~ig~~~~i~~~~~i~~~~~ig~~~~I~~~~~i-~~Sii~~~~~i~~~~~i~-~sIi~~~~~ig~~~~i~d-~~  332 (358)
T COG1208         256 AYIIGPVVIGPGAKIGPGALIGPYTVIGEGVTIGNGVEI-KNSIIMDNVVIGHGSYIG-DSIIGENCKIGASLIIGD-VV  332 (358)
T ss_pred             EEEECCEEECCCCEECCCCEECCCCEECCCCEECCCCEE-EEEEEECCCEECCCCEEC-CEEECCCCEECCCCEEEE-EE
T ss_conf             388589498269789888486898789999888998778-754887787988888882-069818859998615701-58


Q ss_pred             ECCCEEECCCCEEC
Q ss_conf             74984998888996
Q gi|254781223|r   91 VRGNAVVGGDTVVE  104 (110)
Q Consensus        91 I~~~~~I~~~~~I~  104 (110)
T Consensus       333 ~g~~~~i~~g~~~~  346 (358)
T COG1208         333 IGINSEILPGVVVG  346 (358)
T ss_pred             ECCCEEECCCEEEC
T ss_conf             63660862761847