HHsearch alignment for GI: 254781223 and conserved domain: cd04651
>cd04651 LbH_G1P_AT_C Glucose-1-phosphate adenylyltransferase, C-terminal Left-handed parallel beta helix (LbH) domain: Glucose-1-phosphate adenylyltransferase is also known as ADP-glucose synthase or ADP-glucose pyrophosphorylase. It catalyzes the first committed and rate-limiting step in starch biosynthesis in plants and glycogen biosynthesis in bacteria. It is the enzymatic site for regulation of storage polysaccharide accumulation in plants and bacteria. The enzyme is a homotetramer, with each subunit containing an N-terminal catalytic domain that resembles a dinucleotide-binding Rossmann fold and a C-terminal LbH fold domain with at 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). The LbH domain is involved in cooperative allosteric regulation and oligomerization.
Probab=98.29 E-value=1.1e-06 Score=44.42 Aligned_cols=50 Identities=18% Similarity=0.339 Sum_probs=17.5
Q ss_pred EEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCEEECC
Q ss_conf 5520221111222110112222211011111111243220139749849988
Q gi|254781223|r 48 KVGGYAKVSGNASVGGNAIVRDTAEVGGDAFVIGFTVISGNARVRGNAVVGG 99 (110)
Q Consensus 48 ~i~~~~~i~~~~~i~~~~~~~~~~~i~~~~~i~~~~~I~~~~~I~~~~~I~~ 99 (110)
T Consensus 30 VIg~~~~Ig~~a~I-~~svi~~~~~Ig~~~~l-~~~Ii~~~~~I~~g~~Ig~ 79 (104)
T cd04651 30 VLFRGVRVGSGSVV-EDSVIMPNVGIGRNAVI-RRAIIDKNVVIPDGVVIGG 79 (104)
T ss_pred EECCCCEECCCCEE-ECCEEECCCEECCCCEE-EEEEECCCCEECCCCEECC
T ss_conf 97299799999899-60099655689999999-8619999999998999998